Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911462.1_cds_XP_016461441.1_54762
CDS Infomation

[gene=LOC107784774] [db_xref=GeneID:107784774] [protein=FRIGIDA-like protein 4a] [protein_id=XP_016461441.1] [location=join(66294..67179,68835..69010,69663..70151)] [gbkey=CDS]
Sequence

ATGGGTTCACTCGCCGATCCCGGCGAACTCGACTCGGTGGCGCCGTCGCCGAGTTTCGAC
GACTTCCAGCGCCAAACTTCCTTAATGACAAGCTGCACTCTCCTCTGGAAAGAGCTCTCC
GATCACTTCACTTCACTCGAACAAGACATCCTCAAGAAATCCGAAGCCTTAAAAGCTAAA
ATCCAAACCCTAGATTCCGAAACCAAAGCTTCCCTCGACGTCCTTGAAAAACGCGAGAAT
TCAATGAACGTTTCACTCTCAATTTCTCTTCAGAAGGTTCTCGAAAACAAGCAAGCTGCT
ATTTTAGCCCTAGGTGAGGGTGCAGAACAACCCGAAGTCGATGACTCTACTGGATTGTAT
CTAAAATTGAAGAGCTTTTGTGTTAAGATGGATTCTAGAAGCTTCTGGAGGTTTTTAATT
GTAAAAAAGAAGGATTTGGATTCACTTAGGGTTGAAATACCGAAAGCATTAGGAGACTGC
GTGGATCCGCCGAGGTTCGTGTTGGAATCGATATCCGAGGTGTTTCCAGAGGATAAAAGG
CCTAACCCAACCCTTGATTTGGGCTGGGCCTGTGTTTTGATGTTGGAGTCTTTGATTCCA
GTTATGATGGACCCGGTTTTGGGAAATGAGAGGAAATTGGTGACGCCGAGTGTTAAGGAT
AAGGCCAATGATATAGCGGAGATATGGAAGAGGAGCTTGGATGAAAGAGGAGGGATTGAG
AATGTTAAGACGCCCGATGTGCATACTTTCTTGCAGCATTTGGTAACTTTTGGGATAGTG
AAGGATGAGGATTTTGATTTGTACAGGAAACTTGTTGTTGGGTCTGCTTGGAGGAAACAG
ATGCCTAAATTGGCCGTCTCTCTTGGACTTGGTGATAAAATGCCTGAAATGATTGAAGAA
TTAATCAGCCGAGGACAGCAAGTTGATGCCGTACATTTCACTTATGAAGTTGGACTTGCT
GATAGGTTTCCTCCTGTTCCCCTTCTGAAAGCTTATCTAAAAGATGCGAAAAAAGCTGCT
ACTGCAATTCTGGAAGACCCAAATAATTCTGGTCGATCTGCGCATCTAGCTGCAAAGAAA
GAGCAATCAGCGATTCGTTCTGTCCTTAAGTGTATTGAAGAATACAAGCTTGAGGCTGAA
TTCCCTCCAGAAAACCTTAAAAAGCAGCTTGAGCAGTCGGAGAAGCCGAAGAATGAGAAA
AAGAGGCCAGCTGCTGTACCAGCAAATAAAAGAACGAGAGCCAGTAATGTTGGTCCTATG
CCTCCTGCTAAGGCAGGCCGTTCAACAAATGCCTATGTCTCATCTTTCCCAGTAGCCCCG
GCATTTGTTAGGTCTCCCTCACACACCCAATACCCTGCTGCAGTTCCAGCATATGCTGCA
CCACCTGCCATCTACGGTAACAGGAGCCCGCCTTATCCTTACTCTCCAGAAGCTGCCCCA
TATCCAGGCACCCCAGTGAACTACTCTCCAGGCACCCCAGTGAACTATTCTCCATATGGT
GGCTATGGCAATGGGATGGCCCCAGCTTACCAGCAAGTTTACTACCGATAG

Peptide Sequence

PEP ID

XP_016461441.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 4a [Nicotiana tabacum]
Sequence

MGSLADPGELDSVAPSPSFDDFQRQTSLMTSCTLLWKELSDHFTSLEQDILKKSEALKAK
IQTLDSETKASLDVLEKRENSMNVSLSISLQKVLENKQAAILALGEGAEQPEVDDSTGLY
LKLKSFCVKMDSRSFWRFLIVKKKDLDSLRVEIPKALGDCVDPPRFVLESISEVFPEDKR
PNPTLDLGWACVLMLESLIPVMMDPVLGNERKLVTPSVKDKANDIAEIWKRSLDERGGIE
NVKTPDVHTFLQHLVTFGIVKDEDFDLYRKLVVGSAWRKQMPKLAVSLGLGDKMPEMIEE
LISRGQQVDAVHFTYEVGLADRFPPVPLLKAYLKDAKKAATAILEDPNNSGRSAHLAAKK
EQSAIRSVLKCIEEYKLEAEFPPENLKKQLEQSEKPKNEKKRPAAVPANKRTRASNVGPM
PPAKAGRSTNAYVSSFPVAPAFVRSPSHTQYPAAVPAYAAPPAIYGNRSPPYPYSPEAAP
YPGTPVNYSPGTPVNYSPYGGYGNGMAPAYQQVYYR

Transcript Sequence

Gene sequence data has not been registered.